Skip Navigation

This Article
Right arrow Full Text (Print PDF)
Right arrow Alert me when this article is cited
Right arrow Alert me if a correction is posted
Services
Right arrow Email this article to a friend
Right arrow Similar articles in this journal
Right arrow Alert me to new issues of the journal
Right arrow Add to My Personal Archive
Right arrow Download to citation manager
Right arrowRequest Permissions
Google Scholar
Right arrow Articles by Saqi, M. A. S.
Right arrow Articles by Sayle, R.
Right arrow Search for Related Content
PubMed
Right arrow Articles by Saqi, M. A. S.
Right arrow Articles by Sayle, R.
Social Bookmarking
Add to CiteULike   Add to Connotea   Add to Del.icio.us  
What's this?

© Oxford University Press

PdbMotif – A tool for the automatic identification and display of motifs in protein structures

Monsoor A. S. Saqi and Roger Sayle

Bioinformatics Group, Department of Biomolecular Structure, Glaxo Group Research Greenford, Middlesex, UK

A program PdbMotif, which automatically identifies protein motifs in a protein data bank file and generates a script file which can be read directly by the molecular rendering program RasMol, is described. PdbMotif accepts the standard PROSITE pattern syntax and will scan the PROSITE pattern database or a set of user defined patterns. Any motifs detected are automatically highlighted in the RasMol image.

Received on May 19, 1994; accepted on July 5, 1994

Add to CiteULike CiteULike   Add to Connotea Connotea   Add to Del.icio.us Del.icio.us    What's this?


This article has been cited by other articles:


Home page
 Nucleic Acids ResHome page
J.-H. Hung, H.-D. Huang, and T.-Y. Lee
ProKware: integrated software for presenting protein structural properties in protein tertiary structures.
Nucleic Acids Res., July 1, 2006; 34(Web Server issue): W89 - W94.
[Abstract] [Full Text] [PDF]

Home page
 Nucleic Acids ResHome page
A. Gaulton and T. K. Attwood
Motif3D: relating protein sequence motifs to 3D structure
Nucleic Acids Res., July 1, 2003; 31(13): 3333 - 3336.
[Abstract] [Full Text] [PDF]

Home page
 ScienceHome page
E. C. Walsh and D. Y. R. Stainier
UDP-Glucose Dehydrogenase Required for Cardiac Valve Formation in Zebrafish
Science, August 31, 2001; 293(5535): 1670 - 1673.
[Abstract] [Full Text] [PDF]


Disclaimer:
Please note that abstracts for content published before 1996 were created through digital scanning and may therefore not exactly replicate the text of the original print issues. All efforts have been made to ensure accuracy, but the Publisher will not be held responsible for any remaining inaccuracies. If you require any further clarification, please contact our Customer Services Department.