Bioinformatics, Vol 14, 892-893, Copyright © 1998 by Oxford University Press
JA Cuff, ME Clamp, AS Siddiqui, M Finlay and GJ Barton
SUMMARY: An interactive protein secondary structure prediction Internet
server is presented. The server allows a single sequence or multiple
alignment to be submitted, and returns predictions from six secondary
structure prediction algorithms that exploit evolutionary information from
multiple sequences. A consensus prediction is also returned which improves
the average Q3 accuracy of prediction by 1% to 72.9%. The server simplifies
the use of current prediction algorithms and allows conservation patterns
important to structure and function to be identified. AVAILABILITY:
http://barton.ebi.ac.uk/servers/jpred.h tml CONTACT: geoff@ebi.ac.uk
ARTICLES
JPred: a consensus secondary structure prediction server
Laboratory of Molecular Biophysics, Rex Richards Building, South Parks Road, Oxford OX1 3QU, UK.
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