Bioinformatics, Vol 14, 817-818, Copyright © 1998 by Oxford University Press
D Posada and KA Crandall
SUMMARY: The program MODELTEST uses log likelihood scores to establish the
model of DNA evolution that best fits the data. AVAILABILITY: The MODELTEST
package, including the source code and some documentation is available at
http://bioag.byu. edu/zoology/crandall_lab/modeltest.html.
ARTICLES
MODELTEST: testing the model of DNA substitution
Department of Zoology, Brigham Young University, 574 WIDB, Provo, UT 84602-5255, USA. dp47@email.byu.edu
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J. W. Clayton, P. S. Soltis, and D. E. Soltis Recent Long-Distance Dispersal Overshadows Ancient Biogeographical Patterns in a Pantropical Angiosperm Family (Simaroubaceae, Sapindales) Syst Biol, August 14, 2009; (2009) syp041v1. [Abstract] [Full Text] [PDF]
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S. Yamamoto and T. Sota Incipient allochronic speciation by climatic disruption of the reproductive period Proc R Soc B, August 7, 2009; 276(1668): 2711 - 2719. [Abstract] [Full Text] [PDF]
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H. Liu, I. Probert, J. Uitz, H. Claustre, S. Aris-Brosou, M. Frada, F. Not, and C. de Vargas Extreme diversity in noncalcifying haptophytes explains a major pigment paradox in open oceans PNAS, August 4, 2009; 106(31): 12803 - 12808. [Abstract] [Full Text] [PDF]
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J. W. Horn, J. B. Fisher, P. B. Tomlinson, C. E. Lewis, and K. Laubengayer Evolution of lamina anatomy in the palm family (Arecaceae) Am. J. Botany, August 1, 2009; 96(8): 1462 - 1486. [Abstract] [Full Text] [PDF]
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K. J. Wurdack and C. C. Davis Malpighiales phylogenetics: Gaining ground on one of the most recalcitrant clades in the angiosperm tree of life Am. J. Botany, August 1, 2009; 96(8): 1551 - 1570. [Abstract] [Full Text] [PDF]
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C. Li, L. Lu, X. Wu, C. Wang, P. Bennett, T. Lu, and D. Murphy Complete genomic sequences for hepatitis C virus subtypes 4b, 4c, 4d, 4g, 4k, 4l, 4m, 4n, 4o, 4p, 4q, 4r and 4t J. Gen. Virol., August 1, 2009; 90(8): 1820 - 1826. [Abstract] [Full Text] [PDF]
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C. Y. Hwang, M. H. Kim, G. D. Bae, G. I. Zhang, Y. H. Kim, and B. C. Cho Muricauda olearia sp. nov., isolated from crude-oil-contaminated seawater, and emended description of the genus Muricauda Int J Syst Evol Microbiol, August 1, 2009; 59(8): 1856 - 1861. [Abstract] [Full Text] [PDF]
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J. Killer, J. Kopecny, J. Mrazek, V. Rada, O. Benada, I. Koppova, J. Havlik, and J. Straka Bifidobacterium bombi sp. nov., from the bumblebee digestive tract Int J Syst Evol Microbiol, August 1, 2009; 59(8): 2020 - 2024. [Abstract] [Full Text] [PDF]
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 M. A. Olson, R. N. Zajac, and M. A. Russello Estuarine-Scale Genetic Variation in the Polychaete Hobsonia florida (Ampharetidae; Annelida) in Long Island Sound and Relationships to Pleistocene Glaciations Biol. Bull., August 1, 2009; 217(1): 86 - 94. [Abstract] [Full Text] [PDF]
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M. C. De Aranzamendi, C. N. Gardenal, J. P. Martin, and R. Bastida Limpets of the genus Nacella (Patellogastropoda) from the Southwestern Atlantic: species identification based on molecular data J. Mollus. Stud., August 1, 2009; 75(3): 241 - 251. [Abstract] [Full Text] [PDF]
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B. Nitz, R. Heim, U. E. Schneppat, I. Hyman, and G. Haszprunar Towards a new standard in slug species descriptions: the case of Limax sarnensis Heim & Nitz n. sp. (Pulmonata: Limacidae) from the Western Central Alps J. Mollus. Stud., August 1, 2009; 75(3): 279 - 294. [Abstract] [Full Text] [PDF]
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G. A. Salazar, L. I. Cabrera, S. Madrinan, and M. W. Chase Phylogenetic relationships of Cranichidinae and Prescottiinae (Orchidaceae, Cranichideae) inferred from plastid and nuclear DNA sequences Ann. Bot., August 1, 2009; 104(3): 403 - 416. [Abstract] [Full Text] [PDF]
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M. Roy, T. Yagame, M. Yamato, K. Iwase, C. Heinz, A. Faccio, P. Bonfante, and M.-A. Selosse Ectomycorrhizal Inocybe species associate with the mycoheterotrophic orchid Epipogium aphyllum but not its asexual propagules Ann. Bot., August 1, 2009; 104(3): 595 - 610. [Abstract] [Full Text] [PDF]
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K. M. Neubig, N. H. Williams, W. M. Whitten, and F. Pupulin Molecular phylogenetics and the evolution of fruit and leaf morphology of Dichaea (Orchidaceae: Zygopetalinae) Ann. Bot., August 1, 2009; 104(3): 457 - 467. [Abstract] [Full Text] [PDF]
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R. Cerros-Tlatilpa and J. T. Columbus C3 photosynthesis in Aristida longifolia: Implication for photosynthetic diversification in Aristidoideae (Poaceae) Am. J. Botany, August 1, 2009; 96(8): 1379 - 1387. [Abstract] [Full Text] [PDF]
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R. Lucking, J. D. Lawrey, M. Sikaroodi, P. M. Gillevet, J. L. Chaves, H. J. M. Sipman, and F. Bungartz Do lichens domesticate photobionts like farmers domesticate crops? Evidence from a previously unrecognized lineage of filamentous cyanobacteria Am. J. Botany, August 1, 2009; 96(8): 1409 - 1418. [Abstract] [Full Text] [PDF]
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