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Bioinformatics Vol. 15 no. 12 1999
Pages 1062-1063
© 1999 Oxford University Press

A platform for integrating threading results with protein family analyses

Florencio Pazos 1, Burkhard Rost 2 and Alfonso Valencia 1

1 Protein Design Group, CNB-CSIC, Cantoblanco, Madrid 28049, Spain
2 CUBIC Columbia University, Department of Biochemistry and Molecular Biophysics, 630 West 168th Street, New York, NY 10032, USA

Summary: We have developed a package for the interactive visualization of results from different threading programs. Additionally, we have integrated relevant information about protein sequence, function, evolution, and structure into the interface.

Availability: A detailed documentation of THREADLIZE, and the binaries for IRIX, SunOS and Linux are available at http://www.cnb.uam.es/~pazos/threadlize. The package is free for academic users.

Contact: valencia{at}cnb.uam.es

Supplementary information: http://www.cnb.uam.es/~pazos/threadlize

Received on May 16, 1999 ; revised on July 12, 1999 ; accepted on July 29, 1999

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