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Bioinformatics, Vol 15, 262-263, Copyright © 1999 by Oxford University Press

ARTICLES

WWW access to the SYSTERS protein sequence cluster set

A Krause, P Nicodeme, E Bornberg-Bauer, M Rehmsmeier and M Vingron
Deutsches Krebsforschungszentrum, Theoretische Bioinformatik, INF 280, D-69120 Heidelberg, Germany. A.Krause@DKFZ-Heidelberg.de

SUMMARY: We present a Web server where the SYSTERS cluster set of the non-redundant protein database consisting of sequences from SWISS-PROT and PIR is being made available for querying and browsing. The cluster set can be searched with a new sequence using the SSMAL search tool. Additionally, a multiple alignment is generated for each cluster and annotated with domain information from the Pfam protein family database. AVAILABILITY: The server address is http://www.dkfz- heidelberg.de/tbi/services/cluster/ systersform
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