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Bioinformatics, Vol 15, 343-344, Copyright © 1999 by Oxford University Press

ARTICLES

The domain-server: direct prediction of protein domain-homologies from BLAST search

J Murvai, K Vlahovicek, E Barta, S Parthasarathy, H Hegyi, F Pfeiffer and S Pongor
International Centre for Genetic Engineering and Biotechnology, 34012 Trieste, Italy.

RESULTS: A WWW server for protein domain homology prediction, based on BLAST search and a simple data-mining algorithm (Hegyi,H. and Pongor,S. (1993) Comput. Appl. Biosci., 9, 371-372), was constructed providing a tabulated list and a graphic plot of similarities. AVAILABILITY: http://www.icgeb.trieste.it/domain. Mirror site is available at http://sbase.abc.hu/domain. A standalone programme will be available on request. SUPPLEMENTARY INFORMATION: A series of help files is available at the above addresses.
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