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Bioinformatics Vol. 16 no. 11 2000
Pages 1050-1051
© 2000 Oxford University Press

Applications Note

TEXtopo: shaded membrane protein topology plots in LATEX2{epsilon}

Eric Beitz 1

1 Faculty of Chemistry and Pharmacy, University of Tübingen, Morgenstelle 8, 72076 Tübingen, Germany

Received on May 30, 2000 ; revised on July 11, 2000 ; accepted on July 25, 2000

Summary: TEXtopo is a LATEX2{epsilon} macro package for plotting topology data directly from PHD predictions or SwissProt database files in publication-ready quality. The plot can be shaded automatically to emphasize conserved residues or functional properties of the residue sidechains. The addition of rich decorations, such as labels, annotations and legends, is easily accomplished.

Availability: The TEXtopo macro package and a full on-line documentation are freely available at http://homepages.uni-tuebingen.de/beitz/

Contact: eric.beitz{at}uni-tuebingen.de


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