Skip Navigation

This Article
Right arrow FREE Full Text (Print PDF) Freely available
Right arrow FREE Full Text (Screen PDF)
Right arrow Alert me when this article is cited
Right arrow Alert me if a correction is posted
Services
Right arrow Email this article to a friend
Right arrow Similar articles in this journal
Right arrow Similar articles in PubMed
Right arrow Alert me to new issues of the journal
Right arrow Add to My Personal Archive
Right arrow Download to citation manager
Right arrow Search for citing articles in:
ISI Web of Science (5)
Right arrowRequest Permissions
Google Scholar
Right arrow Articles by Xie, G.
Right arrow Articles by Wang, Y.
Right arrow Search for Related Content
PubMed
Right arrow PubMed Citation
Right arrow Articles by Xie, G.
Right arrow Articles by Wang, Y.
Social Bookmarking
Add to CiteULike   Add to Connotea   Add to Del.icio.us  
What's this?

Bioinformatics Vol. 16 no. 3 2000
Pages 288-289
© 2000 Oxford University Press

Storing biological sequence databases in relational form

Guochun Xie 1, Reynold DeMarco 2, Richard Blevins 2 and Yuhong Wang 1

1 Department of Bioinformatics, Merck & Co., Inc., WP42-300, West Point, PA 19486, USA
2 Department of Bioinformatics, Merck & Co., Inc., RY80-A1, Rahway, NJ 07065, USA

Received on July 27, 1999 ; revised on October 25, 1999 ; accepted on October 25, 1999

Summary: We have created a set of applications using Perl and Java in combination with XML technology to install biological sequence databases into an Oracle RDBMS. An easy-to-use interface using Java has been created for database query and other tools developed to integrate with our in-house bioinformatics applications.

Availability: The database schema, DTD file, and source codes are available from the authors via email.

Contact: guochun_ xie{at}merck.com


Add to CiteULike CiteULike   Add to Connotea Connotea   Add to Del.icio.us Del.icio.us    What's this?




Disclaimer:
Please note that abstracts for content published before 1996 were created through digital scanning and may therefore not exactly replicate the text of the original print issues. All efforts have been made to ensure accuracy, but the Publisher will not be held responsible for any remaining inaccuracies. If you require any further clarification, please contact our Customer Services Department.