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Bioinformatics Vol. 17 no. 12 2001
Pages 1232-1233
© 2001 Oxford University Press

Applications Note

Promoter Extraction from GenBank (PEG): automatic extraction of eukaryotic promoter sequences in large sets of genes

Theresa Zhang and Michael Zhang *

Cold Spring Harbor Laboratory, PO Box 100, Cold Spring Harbor, NY 11724, USA

Received on April 6, 2001 ; revised on July 6, 2001 ; accepted on July 11, 2001

Summary: Promoter Extraction from GenBank (PEG) extracts promoter sequences for large sets of genes using information present in GenBank. For a gene whose promoter sequence is not found, PEG will attempt to extract promoter sequences of the orthologous genes instead.

Availability: It is freely available to academic users at ftp://cshl.org/pub/science/mzhanglab/theresa/.

Contact: zhangt{at}cshl.org; mzhang{at}cshl.org

* To whom correspondence should be addressed.


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