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Bioinformatics Vol. 17 no. 7 2001
Pages 658-659
© 2001 Oxford University Press

Applications Note

Visualization of expression clusters using Sammon’s non-linear mapping

Rob M. Ewing 1,* and J. Michael Cherry 2

1 Carnegie Institution of Washington, Department of Plant Biology, 260 Panama Street, Stanford, CA 94305, USA
2 Genetics Department, School of Medicine, Stanford University, Stanford, CA 94305, USA

Received on January 24, 2001 ; revised on March 13, 2001 ; accepted on March 16, 2001

Summary: A method of exploratory analysis and visualization of multi-dimensional gene expression data using Sammon’s Non-Linear Mapping (NLM) is presented.

Availability: Scripts are available from the authors.

Contact: ewing{at}genome.stanford.edu

* To whom correspondence should be addressed.


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