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Bioinformatics Vol. 17 no. 8 2001
Pages 740-741
© 2001 Oxford University Press


Applications Note

Polylink: to support two-point linkage analysis in autotetraploids

Yang He 1, Xiangming Xu 2,*, Kenneth R. Tobutt 2 and Martin S. Ridout 3

1 Department of Electronics, University of Kent at Canterbury, Canterbury, Kent CT2 7NF, UK
2 Horticulture Research International, East Malling, West Malling, Kent ME19 6BJ, UK
3 Institute of Mathematics and Statistics, University of Kent at Canterbury, Canterbury, Kent CT2 7NF, UK

Received on January 23, 2001 ; revised on April 5, 2001 ; accepted on April 23, 2001

Summary: Polylink runs under Microsoft Windows (95 or later). It performs various calculations that are useful for investigating two-point linkage analysis for autopolyploids, based on the random chromosome pairing model. These include calculation of offspring phenotypic probabilities as functions of the recombination fraction, calculation of theoretical standard errors for the maximum likelihood estimator of and numerical computation of maximum likelihood estimates. It also includes simulation facilities.

Availability: Polylink is free and available from Xiangming Xu via email

Contact: xiangming.xu{at}hri.ac.uk

* To whom correspondence should be addressed.


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J HeredHome page
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TetraploidMap: Construction of a Linkage Map in Autotetraploid Species
J. Hered., July 1, 2003; 94(4): 358 - 359.
[Abstract] [Full Text] [PDF]



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