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Bioinformatics Vol. 18 no. 6 2002
Pages 892-893
© 2002 Oxford University Press

Applications Note

BAOBAB: a Java editor for large phylogenetic trees

J. Dutheil and N. Galtier *

1 CNRS UMR 5000 - ‘Génome, Populations, Interactions’, Université Montpellier 2 - CC 63, Place E. Bataillon, 34095 Montpellier, France

Received on October 10, 2001 ; revised on January 7, 2002 ; accepted on January 29, 2002

Summary: BAOBAB is a Java user interface dedicated to viewing and editing large phylogenetic trees. Original features include: (i) a colour-mediated overview of magnified subtrees; (ii) copy/cut/paste of (sub)trees within or between windows; (iii) compressing/ uncompressing subtrees; and (iv) managing sequence files together with tree files.

Availability: http://www.univ-montp2.fr/~genetix/

Contact: julien.dutheil{at}ens-lyon.fr galtier{at}univ-montp2.fr

* To whom correspondence should be addressed.


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