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Bioinformatics Vol. 19 no. 2 2003
Pages 291-292
© 2003 Oxford University Press

Applications Note

Pedstrip: extracting a maximal subset of available, unrelated individuals from a pedigree

Jeremy M.R. Martin *, lan J. Mackay and Christopher J. Rawlings

Oxagen Ltd, 91 Milton Park, Abingdon, Oxon OX14 4RY, UK

Received on April 29, 2002 ; revised on July 15, 2002 ; accepted on July 20, 2002

Summary: Certain types of genetic analysis are simplified by assembling a collection of unrelated individuals, e.g. case-control experiments. If a family study is being performed then it will be necessary to extract subsets of unrelated, available individuals from pedigress. Our program provides an optimal method for performing this task.

Availability: The software is available, free of charge, on request from Oxagen Ltd.

Contact: SD{at}oxagen.co.uk

Supplementary information: http://www.oxagen.co.uk

* To whom correspondence should be addressed.


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J. A. Douglas and C. I. Sandefur
PedMine--a simulated annealing algorithm to identify maximally unrelated individuals in population isolates
Bioinformatics, April 15, 2008; 24(8): 1106 - 1108.
[Abstract] [Full Text] [PDF]


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