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Bioinformatics Vol. 19 no. 6 2003
Pages 772-773
© 2003 Oxford University Press

Applications Note

Client–Server environment for high-performance gene expression data analysis

Alexander Sturn , Bernhard Mlecnik , Roland Pieler , Johannes Rainer , Thomas Truskaller and Zlatko Trajanoski *

Institute of Biomedical Engineering, Graz University of Technology, Christian Doppler Laboratory for Genomics and Bioinformatics, Krenngasse 37, 8010 Graz, Austria

Received on September 2, 2002 ; revised on October 23, 2002 and November 18, 2002 ; accepted on December 16, 2002

Summary: We have developed a platform independent, flexible and scalable Java environment for high-performance large-scale gene expression data analysis, which integrates various computational intensive hierarchical and non-hierarchical clustering algorithms. The environment includes a powerful client for data preparation and results visualization, an application server for computation and an additional administration tool. The package is available free of charge for academic and non-profit institutions.

Availability: http://genome.tugraz.at/Software

Contact: zlatko.trajanoski{at}tugraz.at

* To whom correspondence should be addressed.


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