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Bioinformatics Vol. 19 no. 7 2003
Pages 897-898
© 2003 Oxford University Press

Applications Note

BioEditor—simplifying macromolecular structure annotation

Peng Yang 1, Paul A. Craig 2, David Goodsell 3 and Philip E. Bourne 1,4,*

1 San Diego Supercomputer Center, University of California, San Diego, 9500 Gilman Drive, MC 0505, La Jolla CA 92093-0505.
2 Rochester Institute of Technology, Department of Chemistry, 85 Lomb Memorial Drive, Rochester NY 14623.
3 The Scripps Research Institute, Department of Molecular Biology, 10550 N. Torrey Pines Road, La Jolla CA 92037.
4 Department of Pharmacology, University of California, San Diego, 9500 Gilman Drive, MC 0505, La Jolla CA 92093.

Received on September 9, 2002 ; revised on December 13, 2002 ; accepted on December 26, 2002

Summary: BioEditor is an application to enable scientists and educators to prepare and present structure annotations containing formatted text, graphics, sequence data, and interactive molecular views. It is intended to bridge the gap between printed journal articles and Internet presentation formats. BioEditor is relevant in the era of structural genomics, where annotation and publication could become the rate determining step in structure determination.

Availability: BioEditor is available at http://bioeditor.sdsc.edu. The Web site includes the latest version of the software for Microsoft Windows, including documentation, the opportunity to submit bug reports and suggestions, example documentaries prepared with BioEditor and a repository where users can submit documentaries for posting to the site.

Contact: bourne{at}sdsc.edu

* To whom correspondence should be addressed.


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