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Bioinformatics Advance Access originally published online on April 6, 2005
Bioinformatics 2005 21(11):2791-2793; doi:10.1093/bioinformatics/bti403
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© The Author 2005. Published by Oxford University Press. All rights reserved. For Permissions, please email: journals.permissions{at}oupjournals.org

VariScan: Analysis of evolutionary patterns from large-scale DNA sequence polymorphism data

Albert J. Vilella , Angel Blanco-Garcia , Stephan Hutter {dagger} and Julio Rozas *

Departament de Genètica, Facultat de Biologia, Universitat de Barcelona Diagonal 645, 08028 Barcelona, Spain

*To whom correspondence should be addressed.

Summary: VeriScan is a software package for the analysis of DNA sequence polymorphisms at the whole genome scale. Among other features, the software (1) can conduct many population genetic analyses; (2) incorporates a multiresolution wavelet transform-based method that allows capturing relevant information from DNA polymorphism data; (3) facilitates the visualization of the results in the most commonly used genome browsers.

Availability: The software with documentation is available under the GNU GPL software license from: http://www.ub.es/softevol/variscan

Contact: jrozas{at}ub.edu


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