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Bioinformatics Advance Access originally published online on September 3, 2004
Bioinformatics 2005 21(2):272-274; doi:10.1093/bioinformatics/bth494
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Bioinformatics vol. 21 issue 2 © Oxford University Press 2005; all rights reserved.

ProViz: protein interaction visualization and exploration

Florian Iragne , Macha Nikolski , Bertrand Mathieu , David Auber and David Sherman *

LaBRI UMR 5800, Université Bordeaux 1 351 cours de la Libération, 33405 Talence Cedex, France

*To whom correspondence should be addressed.

Summary: ProViz is a tool for the visualization of protein–protein interaction networks, developed by the IntAct European project. It provides facilities for navigating in large graphs and exploring biologically relevant features, and adopts emerging standards such as GO and PSI-MI.

Availability: ProViz is available under the GPL and may be freely downloaded. Source code and binaries are available at http://cbi.labri.fr/eng/proviz.htm

Contact: david.sherman{at}labri.fr


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