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Bioinformatics Advance Access originally published online on October 4, 2005
Bioinformatics 2005 21(23):4304-4306; doi:10.1093/bioinformatics/bti691
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© The Author 2005. Published by Oxford University Press. All rights reserved. For Permissions, please email: journals.permissions{at}oxfordjournals.org

CREDO: a web-based tool for computational detection of conserved sequence motifs in noncoding sequences

Tobias Hindemitt and Klaus F. X. Mayer *

MIPS/Institute for Bioinformatics, GSF Research Centre for Environment and Health Ingolstaedter Landstrasse 1, 85758 Neuherberg, Germany

*To whom correspondence should be addressed.

Summary: CREDO is a user-friendly, web-based tool that integrates the analysis and results of different algorithms widely used for the computational detection of conserved sequence motifs in noncoding sequences. It enables easy comparison of the individual results. CREDO offers intuitive interfaces for easy and rapid configuration of the applied algorithms and convenient views on the results in graphical and tabular formats.

Availability: http://mips.gsf.de/proj/regulomips/credo.htm

Contact: kmayer{at}gsf.de

Supplementary information: A detailed help file for CREDO is available on http://mips.gsf.de/proj/regulomips/help.htm. Further supplementary material is available on Bioinformatics online.

Received on May 13, 2005; revised on September 19, 2005; accepted on September 23, 2005

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