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Bioinformatics Advance Access originally published online on September 27, 2005
Bioinformatics 2005 21(24):4432-4433; doi:10.1093/bioinformatics/bti696
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© The Author 2005. Published by Oxford University Press. All rights reserved. For Permissions, please email: journals.permissions{at}oxfordjournals.org

Medusa: a simple tool for interaction graph analysis

Sean D. Hooper 1,* and Peer Bork 1,2

1European Molecular Biology Laboratory Heidelberg, Germany
2Max Delbrück Center for Molecular Medicine Berlin-Buch, Germany

*To whom correspondence should be addressed.

Summary: Medusa is a Java application for visualizing and manipulating graphs of interaction, such as data from the STRING database. It features an intuitive user interface developed with the help of biologists. Medusa is optimized for accessing protein interaction data from STRING, but can be used for any type of graph from any scientific field.

Availability: Medusa, along with sample datasets and instructions, can be downloaded from http://www.bork.embl.de/medusa

Contact: hooper{at}embl.de

Received on June 28, 2005; revised on September 13, 2005; accepted on September 26, 2005

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