Bioinformatics Advance Access originally published online on January 12, 2005
Bioinformatics 2005 21(9):2104-2105; doi:10.1093/bioinformatics/bti263
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ProtTest: selection of best-fit models of protein evolution
1Department of Biochemistry, Genetics and Immunology, Universidad de Vigo 36310 Vigo, Spain
2Department of Biodiversity and Evolutionary Biology, Museo Nacional de Ciencias Naturales 28006 Madrid, Spain
*To whom correspondence should be addressed.
Summary: Using an appropriate model of amino acid replacement is very important for the study of protein evolution and phylogenetic inference. We have built a tool for the selection of the best-fit model of evolution, among a set of candidate models, for a given protein sequence alignment.
Availability: ProtTest is available under the GNU license from http://darwin.uvigo.es
Contact: fabascal{at}uvigo.es
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