Bioinformatics Advance Access originally published online on February 10, 2005
Bioinformatics 2005 21(9):2128-2129; doi:10.1093/bioinformatics/bti282
| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
PowerMarker: an integrated analysis environment for genetic marker analysis
Bioinformatics Research Center Campus Box 7566 North Carolina State University Raleigh, NC 27695-7566, USA
*To whom correspondence should be addressed.
Summary: PowerMarker delivers a data-driven, integrated analysis environment (IAE) for genetic data. The IAE integrates data management, analysis and visualization in a user-friendly graphical user interface. It accelerates the analysis lifecycle and enables users to maintain data integrity throughout the process. An ever-growing list of more than 50 different statistical analyses for genetic markers has been implemented in PowerMarker.
Availability: www.powermarker.net
Contact: powermarker{at}hotmail.com
CiteULike 
Connotea 
Del.icio.us What's this?
This article has been cited by other articles:
|
|
 |
|
  G. Wang, K. L. Spencer, B. L. Court, L. M. Olson, W. K. Scott, J. L. Haines, and M. A. Pericak-Vance Localization of Age-Related Macular Degeneration-Associated ARMS2 in Cytosol, Not Mitochondria Invest. Ophthalmol. Vis. Sci., July 1, 2009; 50(7): 3084 - 3090. [Abstract] [Full Text] [PDF]
|
|
|
|
 |
|
 A. Elce, A. Boccia, G. Cardillo, S. Giordano, R. Tomaiuolo, G. Paolella, and G. Castaldo Three Novel CFTR Polymorphic Repeats Improve Segregation Analysis for Cystic Fibrosis Clin. Chem., July 1, 2009; 55(7): 1372 - 1379. [Abstract] [Full Text] [PDF]
|
|
|
|
 |
|
 T. Dhliwayo, K. Pixley, A. Menkir, and M. Warburton Combining Ability, Genetic Distances, and Heterosis among Elite CIMMYT and IITA Tropical Maize Inbred Lines Crop Sci., June 26, 2009; 49(4): 1201 - 1210. [Abstract] [Full Text] [PDF]
|
|
|
|
|
|
H.S. Moon, J.S. Nicholson, A. Heineman, K. Lion, R. van der Hoeven, A.J. Hayes, and R.S. Lewis Changes in Genetic Diversity of U.S. Flue-Cured Tobacco Germplasm over Seven Decades of Cultivar Development Crop Sci., March 17, 2009; 49(2): 498 - 508. [Abstract] [Full Text] [PDF]
|
|
|
|
|
|
M. Kwak, J. A. Kami, and P. Gepts The Putative Mesoamerican Domestication Center of Phaseolus vulgaris Is Located in the Lerma-Santiago Basin of Mexico Crop Sci., March 17, 2009; 49(2): 554 - 563. [Abstract] [Full Text] [PDF]
|
|
|
|
 |
|
 S. C. Murray, W. L. Rooney, M. T. Hamblin, S. E. Mitchell, and S. Kresovich Sweet Sorghum Genetic Diversity and Association Mapping for Brix and Height The Plant Genome, March 1, 2009; 2(1): 48 - 62. [Abstract] [Full Text] [PDF]
|
|
|
|
 |
|
 K.K. Ryckman, H.N. Simhan, M.A. Krohn, and S.M. Williams Predicting risk of bacterial vaginosis: the role of race, smoking and corticotropin-releasing hormone-related genes Mol. Hum. Reprod., February 1, 2009; 15(2): 131 - 137. [Abstract] [Full Text] [PDF]
|
|
|
|
 |
|
 E. Lipkin, K. Straus, R. T. Stein, A. Bagnato, F. Schiavini, L. Fontanesi, V. Russo, I. Medugorac, M. Foerster, J. Solkner, et al. Extensive Long-Range and Nonsyntenic Linkage Disequilibrium in Livestock Populations: Deconstruction of a Conundrum Genetics, February 1, 2009; 181(2): 691 - 699. [Abstract] [Full Text] [PDF]
|
|
|
|
 |
|
 Z. Sztankoova, J. Kysel'ova, T. Kott, and E. Kottova Technical Note: Detection of the C Allele of {beta}-Casein (CSN2) in Czech Dairy Goat Breeds Using LightCycler Analysis J Dairy Sci, October 1, 2008; 91(10): 4053 - 4057. [Abstract] [Full Text] [PDF]
|
|
|
|
|
|
A. L. Weber, W. H. Briggs, J. Rucker, B. M. Baltazar, J. de Jesus Sanchez-Gonzalez, P. Feng, E. S. Buckler, and J. Doebley The Genetic Architecture of Complex Traits in Teosinte (Zea mays ssp. parviglumis): New Evidence From Association Mapping Genetics, October 1, 2008; 180(2): 1221 - 1232. [Abstract] [Full Text] [PDF]
|
|
|
|
 |
|
 H. Jones, F. J. Leigh, I. Mackay, M. A. Bower, L. M.J. Smith, M. P. Charles, G. Jones, M. K. Jones, T. A. Brown, and W. Powell Population-Based Resequencing Reveals That the Flowering Time Adaptation of Cultivated Barley Originated East of the Fertile Crescent Mol. Biol. Evol., October 1, 2008; 25(10): 2211 - 2219. [Abstract] [Full Text] [PDF]
|
|
|
|
|
|
R. J. Wisser, S. C. Murray, J. M. Kolkman, H. Ceballos, and R. J. Nelson Selection Mapping of Loci for Quantitative Disease Resistance in a Diverse Maize Population Genetics, September 1, 2008; 180(1): 583 - 599. [Abstract] [Full Text] [PDF]
|
|
|
|
 |
|
 C. M. Ciarleglio, K. K. Ryckman, S. V. Servick, A. Hida, S. Robbins, N. Wells, J. Hicks, S. A. Larson, J. P. Wiedermann, K. Carver, et al. Genetic Differences in Human Circadian Clock Genes among Worldwide Populations J Biol Rhythms, August 1, 2008; 23(4): 330 - 340. [Abstract] [PDF]
|
|
|
|
 |
|
 M Mamtani, B Rovin, R Brey, J F Camargo, H Kulkarni, M Herrera, P Correa, S Holliday, J-M Anaya, and S K Ahuja CCL3L1 gene-containing segmental duplications and polymorphisms in CCR5 affect risk of systemic lupus erythaematosus Ann Rheum Dis, August 1, 2008; 67(8): 1076 - 1083. [Abstract] [Full Text] [PDF]
|
|
|
|
 |
|
 K. L. Spencer, L. M. Olson, B. M. Anderson, N. Schnetz-Boutaud, W. K. Scott, P. Gallins, A. Agarwal, E. A. Postel, M. A. Pericak-Vance, and J. L. Haines C3 R102G polymorphism increases risk of age-related macular degeneration Hum. Mol. Genet., June 15, 2008; 17(12): 1821 - 1824. [Abstract] [Full Text] [PDF]
|
|
|
|
|
|
D. R. Velez, S. J. Fortunato, S. M. Williams, and R. Menon Interleukin-6 (IL-6) and receptor (IL6-R) gene haplotypes associate with amniotic fluid protein concentrations in preterm birth Hum. Mol. Genet., June 1, 2008; 17(11): 1619 - 1630. [Abstract] [Full Text] [PDF]
|
|
|
|
 |
|
 P. A. Brevis, N. V. Bassil, J. R. Ballington, and J. F. Hancock Impact of Wide Hybridization on Highbush Blueberry Breeding J. Amer. Soc. Hort. Sci., May 1, 2008; 133(3): 427 - 437. [Abstract] [Full Text] [PDF]
|
|
|
|
|
|
F. Condon, C. Gustus, D. C. Rasmusson, and K. P. Smith Effect of Advanced Cycle Breeding on Genetic Diversity in Barley Breeding Germplasm Crop Sci., May 1, 2008; 48(3): 1027 - 1036. [Abstract] [Full Text] [PDF]
|
|
|
|
 |
|
 H. Saeidi, M. R. Rahiminejad, and J. S. Heslop-Harrison Retroelement Insertional Polymorphisms, Diversity and Phylogeography within Diploid, D-genome Aegilops tauschii (Triticeae, Poaceae) Sub-taxa in Iran Ann. Bot., April 1, 2008; 101(6): 855 - 861. [Abstract] [Full Text] [PDF]
|
|
|
|
|
|
J.-D. Lee, J.-K. Yu, Y.-H. Hwang, S. Blake, Y.-S. So, G.-J. Lee, H. T. Nguyen, and J. G. Shannon Genetic Diversity of Wild Soybean (Glycine soja Sieb. and Zucc.) Accessions from South Korea and Other Countries Crop Sci., March 19, 2008; 48(2): 606 - 616. [Abstract] [Full Text] [PDF]
|
|
|
|
 |
|
 U. I. Schwarz, M. D. Ritchie, Y. Bradford, C. Li, S. M. Dudek, A. Frye-Anderson, R. B. Kim, D. M. Roden, and C. M. Stein Genetic Determinants of Response to Warfarin during Initial Anticoagulation N. Engl. J. Med., March 6, 2008; 358(10): 999 - 1008. [Abstract] [Full Text] [PDF]
|
|
|
|
|
|
A. M. Casa, G. Pressoir, P. J. Brown, S. E. Mitchell, W. L. Rooney, M. R. Tuinstra, C. D. Franks, and S. Kresovich Community Resources and Strategies for Association Mapping in Sorghum Crop Sci., January 16, 2008; 48(1): 30 - 40. [Abstract] [Full Text] [PDF]
|
|
|
|
 |
|
 A.-C. Thuillet, M. I. Tenaillon, L. K. Anderson, S. E. Mitchell, S. Kresovich, S. M. Stack, B. Gaut, and J. Doebley A Weak Effect of Background Selection on Trinucleotide Microsatellites in Maize J. Hered., January 1, 2008; 99(1): 45 - 55. [Abstract] [Full Text] [PDF]
|
|
|
|
|
|
A. Weber, R. M. Clark, L. Vaughn, J. de Jesus Sanchez-Gonzalez, J. Yu, B. S. Yandell, P. Bradbury, and J. Doebley Major Regulatory Genes in Maize Contribute to Standing Variation in Teosinte (Zea mays ssp. parviglumis) Genetics, December 1, 2007; 177(4): 2349 - 2359. [Abstract] [Full Text] [PDF]
|
|
|
|
|
|
C. Andreescu, S. Avendano, S. R. Brown, A. Hassen, S. J. Lamont, and J. C. M. Dekkers Linkage Disequilibrium in Related Breeding Lines of Chickens Genetics, December 1, 2007; 177(4): 2161 - 2169. [Abstract] [Full Text] [PDF]
|
|
|
|
 |
|
 E Van Eyken, G Van Camp, E Fransen, V Topsakal, J J Hendrickx, K Demeester, P Van de Heyning, E Maki-Torkko, S Hannula, M Sorri, et al. Contribution of the N-acetyltransferase 2 polymorphism NAT2*6A to age-related hearing impairment J. Med. Genet., September 1, 2007; 44(9): 570 - 578. [Abstract] [Full Text] [PDF]
|
|
|
|
|
|
K. R. Kottapalli, M. D. Burow, G. Burow, J. Burke, and N. Puppala Molecular Characterization of the U.S. Peanut Mini Core Collection Using Microsatellite Markers Crop Sci., July 30, 2007; 47(4): 1718 - 1727. [Abstract] [Full Text] [PDF]
|
|
|
|
|
|
S. Chao, W. Zhang, J. Dubcovsky, and M. Sorrells Evaluation of Genetic Diversity and Genome-wide Linkage Disequilibrium among U.S. Wheat (Triticum aestivum L.) Germplasm Representing Different Market Classes Crop Sci., May 31, 2007; 47(3): 1018 - 1030. [Abstract] [Full Text] [PDF]
|
|
|
|
|
|
S. Cauci, M. Di Santolo, G. Casabellata, K. Ryckman, S. M. Williams, and S. Guaschino Association of interleukin-1{beta} and interleukin-1 receptor antagonist polymorphisms with bacterial vaginosis in non-pregnant Italian women Mol. Hum. Reprod., April 1, 2007; 13(4): 243 - 250. [Abstract] [Full Text] [PDF]
|
|
|
|
|
|
P. Jayamani, S. Negrao, M. Martins, B. Macas, and M. M. Oliveira Genetic Relatedness of Portuguese Rice Accessions from Diverse Origins as Assessed by Microsatellite Markers Crop Sci., March 1, 2007; 47(2): 879 - 884. [Abstract] [Full Text] [PDF]
|
|
|
|
 |
|
 A. Lazo-Langner, G. A. Knoll, P. S. Wells, N. Carson, and M. A. Rodger The risk of dialysis access thrombosis is related to the transforming growth factor-beta1 production haplotype and is modified by polymorphisms in the plasminogen activator inhibitor-type 1 gene Blood, December 15, 2006; 108(13): 4052 - 4058. [Abstract] [Full Text] [PDF]
|
|
|
|
|
|
D. Zhang, S. Mischke, R. Goenaga, A. A. Hemeida, and J. A. Saunders Accuracy and Reliability of High-Throughput Microsatellite Genotyping for Cacao Clone Identification Crop Sci., September 8, 2006; 46(5): 2084 - 2092. [Abstract] [Full Text] [PDF]
|
|
|
|
|
|
L. Pariset, I. Cappuccio, P. Ajmone-Marsan, M. Bruford, S. Dunner, O. Cortes, G. Erhardt, E.-M. Prinzenberg, K. Gutscher, S. Joost, et al. Characterization of 37 Breed-Specific Single-Nucleotide Polymorphisms in Sheep J. Hered., September 1, 2006; 97(5): 531 - 534. [Abstract] [Full Text] [PDF]
|
|
|
|
|
|
H. Zhang, X. Luo, H. R. Kranzler, J. Lappalainen, B.-Z. Yang, E. Krupitsky, E. Zvartau, and J. Gelernter Association between two {micro}-opioid receptor gene (OPRM1) haplotype blocks and drug or alcohol dependence Hum. Mol. Genet., March 15, 2006; 15(6): 807 - 819. [Abstract] [Full Text] [PDF]
|
|