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Bioinformatics Advance Access originally published online on November 2, 2005
Bioinformatics 2006 22(1):103-105; doi:10.1093/bioinformatics/bti749
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© The Author 2005. Published by Oxford University Press. All rights reserved. For Permissions, please email: journals.permissions@oxfordjournals.org

BioThesaurus: a web-based thesaurus of protein and gene names

Hongfang Liu 1, Zhang-Zhi Hu 2, Jian Zhang 2 and Cathy Wu 2

1Department of Information Systems, University of Maryland at Baltimore County 1000 Hilltop Circle, MD 21250, USA
2Department of Biochemistry and Molecular Biology, Georgetown University Medical Center Washington DC, USA

*To whom correspondence should be addressed.

BioThesaurus is a web-based system designed to map a comprehensive collection of protein and gene names to protein entries in the UniProt Knowledgebase. Currently covering more than two million proteins, BioThesaurus consists of over 2.8 million names extracted from multiple molecular biological databases according to the database cross-references in iProClass. The BioThesaurus web site allows the retrieval of synonymous names of given protein entries and the identification of protein entries sharing the same names.

Availability: BioThesaurus is accessible for online searching at http://pir.georgetown.edu/iprolink/biothesaurus

Contact: hfliu{at}umbc.edu

Supplementary information: Supplementary data are accessible at http://pir.georgetown.edu/iprolink/biothesaurus/supplement/

Received on May 31, 2005; revised on October 24, 2005; accepted on October 27, 2005

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