Skip Navigation


Bioinformatics Advance Access originally published online on July 31, 2006
Bioinformatics 2006 22(20):2567-2569; doi:10.1093/bioinformatics/btl421
This Article
Right arrow Full Text Freely available
Right arrow FREE Full Text (Print PDF) Freely available
Right arrow All Versions of this Article:
22/20/2567    most recent
btl421v1
Right arrow Alert me when this article is cited
Right arrow Alert me if a correction is posted
Services
Right arrow Email this article to a friend
Right arrow Similar articles in this journal
Right arrow Similar articles in ISI Web of Science
Right arrow Similar articles in PubMed
Right arrow Alert me to new issues of the journal
Right arrow Add to My Personal Archive
Right arrow Download to citation manager
Right arrow Search for citing articles in:
ISI Web of Science (2)
Right arrowRequest Permissions
Google Scholar
Right arrow Articles by Bonis, J.
Right arrow Articles by Sanz, F.
Right arrow Search for Related Content
PubMed
Right arrow PubMed Citation
Right arrow Articles by Bonis, J.
Right arrow Articles by Sanz, F.
Social Bookmarking
Add to CiteULike   Add to Connotea   Add to Del.icio.us  
What's this?

© The Author 2006. Published by Oxford University Press. All rights reserved. For Permissions, please email: journals.permissions@oxfordjournals.org

OSIRIS: a tool for retrieving literature about sequence variants

Julio Bonis , Laura Inés Furlong and Ferran Sanz *

Research Unit on Biomedical Informatics (GRIB), IMIM Universitat Pompeu Fabra, carrer Dr Aiguader 88, E-08003 Barcelona, Spain

*To whom correspondence should be addressed.

Summary: Sequence variants, in particular single nucleotide polymorphisms (SNPs), are key elements for the identification of genes associated with complex diseases and with particular drug responses. The search for literature about sequence variation is hampered by the large number of allelic variants reported for many genes and by the variability in both gene and sequence variants nomenclatures. We describe OSIRIS, a search tool that integrates different sources of information with the aim to retrieve literature about sequence variation of a gene. In addition, it provides a method to link a dbSNP entry with the articles referring to it.

Availability: OSIRIS is available for public use at http://ibi.imim.es/

Contact: fsanz{at}imim.es

Supplementary information: Supplementary data are available at Bioinformatics online.

Received on April 19, 2006; revised on July 13, 2006; accepted on July 28, 2006

Add to CiteULike CiteULike   Add to Connotea Connotea   Add to Del.icio.us Del.icio.us    What's this?


This article has been cited by other articles:


Home page
 BioinformaticsHome page
J. G. Caporaso, W. A. Baumgartner Jr, D. A. Randolph, K. B. Cohen, and L. Hunter
MutationFinder: a high-performance system for extracting point mutation mentions from text
Bioinformatics, July 15, 2007; 23(14): 1862 - 1865.
[Abstract] [Full Text] [PDF]


Disclaimer:
Please note that abstracts for content published before 1996 were created through digital scanning and may therefore not exactly replicate the text of the original print issues. All efforts have been made to ensure accuracy, but the Publisher will not be held responsible for any remaining inaccuracies. If you require any further clarification, please contact our Customer Services Department.