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Bioinformatics Advance Access originally published online on October 12, 2006
Bioinformatics 2006 22(23):2960-2961; doi:10.1093/bioinformatics/btl518
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© The Author 2006. Published by Oxford University Press. All rights reserved. For Permissions, please email: journals.permissions@oxfordjournals.org

ssSNPer: identifying statistically similar SNPs to aid interpretation of genetic association studies

Dale R. Nyholt

Genetic Epidemiology Laboratory, QIMR 300 Herston Road, Brisbane, Queensland, 4006, Australia

Summary: ssSNPer is a novel user-friendly web interface that provides easy determination of the number and location of untested HapMap SNPs, in the region surrounding a tested HapMap SNP, which are statistically similar and would thus produce comparable and perhaps more significant association results. Identification of ssSNPs can have crucial implications for the interpretation of the initial association results and the design of follow-up studies.

Availability: http://fraser.qimr.edu.au/general/daleN/ssSNPer/

Contact: daleN{at}qimr.edu.au

Received on September 8, 2006; revised on October 5, 2006; accepted on October 5, 2006

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