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Bioinformatics Advance Access originally published online on April 3, 2009
Bioinformatics 2009 25(11):1451-1452; doi:10.1093/bioinformatics/btp187
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© The Author 2009. Published by Oxford University Press. All rights reserved. For Permissions, please email: journals.permissions@oxfordjournals.org

DnaSP v5: a software for comprehensive analysis of DNA polymorphism data

P. Librado 1,2 and J. Rozas 1,2,*

1Departament de Genètica, Facultat de Biologia and 2Institut de Recerca de la Biodiversitat, Universitat de Barcelona, Diagonal 645, 08028 Barcelona, Spain

*To whom correspondence should be addressed.


  Abstract

Motivation: DnaSP is a software package for a comprehensive analysis of DNA polymorphism data. Version 5 implements a number of new features and analytical methods allowing extensive DNA polymorphism analyses on large datasets. Among other features, the newly implemented methods allow for: (i) analyses on multiple data files; (ii) haplotype phasing; (iii) analyses on insertion/deletion polymorphism data; (iv) visualizing sliding window results integrated with available genome annotations in the UCSC browser.

Availability: Freely available to academic users from: http://www.ub.edu/dnasp

Contact: jrozas{at}ub.edu

Associate Editor: Martin Bishop

Received on February 10, 2009; revised on April 2, 2009; accepted on April 2, 2009

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