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Bioinformatics Advance Access originally published online on August 4, 2009
Bioinformatics 2009 25(22):3031-3032; doi:10.1093/bioinformatics/btp475
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© The Author 2009. Published by Oxford University Press. All rights reserved. For Permissions, please email: journals.permissions@oxfordjournals.org

PubMed-EX: a web browser extension to enhance PubMed search with text mining features

Richard Tzong-Han Tsai 1,*, Hong-Jie Dai 2,3, Po-Ting Lai 1 and Chi-Hsin Huang 2

1Department of Computer Science and Engineering, Yuan Ze University, Chung Li, 2Institute of Information Science, Academia Sinica, Nankang, Taipei and 3Department of Computer Science, National Tsing-Hua University, HsinChu, Taiwan, R.O.C.

*To whom correspondence should be addressed.


  Abstract

Summary: PubMed-EX is a browser extension that marks up PubMed search results with additional text-mining information. PubMed-EX's page mark-up, which includes section categorization and gene/disease and relation mark-up, can help researchers to quickly focus on key terms and provide additional information on them. All text processing is performed server-side, freeing up user resources.

Availability: PubMed-EX is freely available at http://bws.iis.sinica.edu.tw/PubMed-EX and http://iisr.cse.yzu.edu.tw:8000/PubMed-EX/.

Contact: thtsai{at}saturn.yzu.edu.tw

Supplementary information: Supplementary data are available at Bioinformatics online.

Associate Editor: Jonathan Wren

Received on March 12, 2009; revised on July 10, 2009; accepted on July 28, 2009

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