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Bioinformatics Advance Access originally published online on July 30, 2009
Bioinformatics 2009 25(22):3040-3042; doi:10.1093/bioinformatics/btp458
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© The Author(s) 2009. Published by Oxford University Press.
This is an Open Access article distributed under the terms of the Creative Commons Attribution Non-Commercial License (http://creativecommons.org/licenses/by-nc/2.5/uk/) which permits unrestricted non-commercial use, distribution, and reproduction in any medium, provided the original work is properly cited.

CMap 1.01: a comparative mapping application for the Internet

Ken Youens-Clark 1,*, Ben Faga 1, Immanuel V. Yap 2, Lincoln Stein 1 and Doreen Ware 1,3

1Cold Spring Harbor Laboratories, Cold Spring Harbor, NY 11724, 2Department of Plant Breeding and Genetics, Cornell University, Ithaca and 3USDA-ARS NAA Plant, Soil & Nutrition Laboratory Research Unit, Ithaca, NY 14853, USA

*To whom correspondence should be addressed.


  Abstract

Summary:CMap is a web-based tool for displaying and comparing maps of any type and from any species. A user can compare an unlimited number of maps, view pair-wise comparisons of known correspondences, and search for maps or for features by name, species, type and accession. CMap is freely available, can run on a variety of database engines and uses only free and open software components.

Availability: http://www.gmod.org/cmap

Contact: kclark{at}cshl.edu

Associate Editor: Alex Bateman

Received on June 10, 2009; revised on July 17, 2009; accepted on July 20, 2009

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