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© IRL Press at Oxford University Press

STATSEARCH: a GCG-compatible program for assessing statistical significance during DNA and protein databank searches

R. F. Mott and T. B .L. Kirkwood

Laboratory of Mathematical Biology, National Institute for Medical Research The Ridgeway, Mill Hill, London NW7 1AA, UK

We describe a program STATSEARCH which implements the method of Mott et al. (1989) for searching DNA and protein sequence databanks for statistically significant similarities to a given query sequence. STATSEARCH is written to run in conjunction with the GCG sequence analysis package.


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