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Bioinformatics Advance Access published online on April 8, 2004
Bioinformatics, doi:10.1093/bioinformatics/bth248
Bioinformatics © Oxford University Press 2004; all rights reserved
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Received November 10, 2003
Accepted February 24, 2004

Applications note

POLYVIEW: a flexible visualization tool for structural and functional annotations of proteins

Aleksei A. Porollo 1, Rafal Adamczak 1, Jaroslaw Meller 1*

1 Children's Hospital Research Foundation, 3333 Burnet Avenue, Cincinnati, OH 45229, USA

* To whom correspondence should be addressed. E-mail: jmeller{at}cchmc.org.


  Abstract

Summary: The POLYVIEW visualization server can be used to generate protein sequence annotations, including secondary structures, relative solvent accessibilities, functional motifs and polymorphic sites. Two-dimensional graphical representations in a customizable format may be generated for both known protein structures and predictions obtained using protein structure prediction servers. POLYVIEW may be used for automated generation of pictures with structural and functional annotations for publications and proteomic on-line resources.

Availability: http://polyview.cchmc.org.


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