Skip Navigation



Bioinformatics Advance Access published online on October 28, 2004
Bioinformatics, doi:10.1093/bioinformatics/bti097
Bioinformatics © Oxford University Press 2004; all rights reserved
This Article
Right arrow Advance Access manuscript (PDF) Freely available
Right arrow All Versions of this Article:
21/6/825    most recent
bti097v1
Right arrow Alert me when this article is cited
Right arrow Alert me if a correction is posted
Services
Right arrow Email this article to a friend
Right arrow Similar articles in this journal
Right arrow Similar articles in PubMed
Right arrow Alert me to new issues of the journal
Right arrow Add to My Personal Archive
Right arrow Download to citation manager
Right arrowRequest Permissions
Google Scholar
Right arrow Articles by Aitken, S.
Right arrow Articles by Bard, J.
Right arrow Search for Related Content
PubMed
Right arrow PubMed Citation
Right arrow Articles by Aitken, S.
Right arrow Articles by Bard, J.
Social Bookmarking
Add to CiteULike   Add to Connotea   Add to Del.icio.us  
What's this?

Received June 1, 2004
Revised September 23, 2004
Accepted October 11, 2004

Applications note

COBrA: a bio-ontology editor

Stuart Aitken 1*, Roman Korf 1, Bonnie Webber 1, and Jonathan Bard 2

1 School of Informatics, The University of Edinburgh, Edinburgh EH8 9LE, United Kingdom
2 Biomedical Science, The University of Edinburgh, Edinburgh EH8 9LE, United Kingdom

* To whom correspondence should be addressed.
Stuart Aitken, E-mail: stuart{at}aiai.ed.ac.uk


  Abstract

COBrA is a Java-based ontology editor for bio-ontologies that distinguishes itself from other editors by supporting the linking of concepts between two ontologies, and providing sophisticated analysis and verification functions. In addition to the Gene Ontology and Open Biology Ontologies formats, COBrA can import and export ontologies in the Semantic Web formats RDF, RDFS and OWL.

Availability: www.xspan.org.


Add to CiteULike CiteULike   Add to Connotea Connotea   Add to Del.icio.us Del.icio.us    What's this?


This article has been cited by other articles:


Home page
 Brief BioinformHome page
O. Bodenreider and R. Stevens
Bio-ontologies: current trends and future directions
Brief Bioinform, September 1, 2006; 7(3): 256 - 274.
[Abstract] [Full Text] [PDF]

Home page
 BioinformaticsHome page
S. Aitken
Formalizing concepts of species, sex and developmental stage in anatomical ontologies
Bioinformatics, June 1, 2005; 21(11): 2773 - 2779.
[Abstract] [Full Text] [PDF]


Disclaimer: Please note that abstracts for content published before 1996 were created through digital scanning and may therefore not exactly replicate the text of the original print issues. All efforts have been made to ensure accuracy, but the Publisher will not be held responsible for any remaining inaccuracies. If you require any further clarification, please contact our Customer Services Department.