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Bioinformatics Advance Access published online on October 28, 2004
Bioinformatics, doi:10.1093/bioinformatics/bti097
Bioinformatics © Oxford University Press 2004; all rights reserved
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Received June 1, 2004
Revised September 23, 2004
Accepted October 11, 2004

Applications note

COBrA: a bio-ontology editor

Stuart Aitken 1*, Roman Korf 1, Bonnie Webber 1, and Jonathan Bard 2

1 School of Informatics, The University of Edinburgh, Edinburgh EH8 9LE, United Kingdom
2 Biomedical Science, The University of Edinburgh, Edinburgh EH8 9LE, United Kingdom

* To whom correspondence should be addressed.
Stuart Aitken, E-mail: stuart{at}aiai.ed.ac.uk


  Abstract

COBrA is a Java-based ontology editor for bio-ontologies that distinguishes itself from other editors by supporting the linking of concepts between two ontologies, and providing sophisticated analysis and verification functions. In addition to the Gene Ontology and Open Biology Ontologies formats, COBrA can import and export ontologies in the Semantic Web formats RDF, RDFS and OWL.

Availability: www.xspan.org.


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