TREECON for Windows: a software package for the construction and drawing of evolutionary trees for the Microsoft Windows environment
Yves Van de Peer and Rupert De Wachter
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Article topics:
- Evolution..Phylogenetic Analysis
- Microbiology..Candida
- Evolution..Phylogenetics
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C. Diaz, S. Baena, M.-L. Fardeau, and B. K. C. Patel Aminiphilus circumscriptus gen. nov., sp. nov., an anaerobic amino-acid-degrading bacterium from an upflow anaerobic sludge reactor Int J Syst Evol Microbiol, August 1, 2007; 57(8): 1914 - 1918. [Abstract] [Full Text] [PDF]
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E. Harth, J. Romero, R. Torres, and R. T. Espejo Intragenomic heterogeneity and intergenomic recombination among Vibrio parahaemolyticus 16S rRNA genes Microbiology, August 1, 2007; 153(8): 2640 - 2647. [Abstract] [Full Text] [PDF]
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M. P. B. Sandrini, O. Shannon, A. R. Clausen, L. Bjorck, and J. Piskur Deoxyribonucleoside Kinases Activate Nucleoside Antibiotics in Severely Pathogenic Bacteria Antimicrob. Agents Chemother., August 1, 2007; 51(8): 2726 - 2732. [Abstract] [Full Text] [PDF]
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D. Yu. Sorokin, T. P. Tourova, G. Braker, and G. Muyzer Thiohalomonas denitrificans gen. nov., sp. nov. and Thiohalomonas nitratireducens sp. nov., novel obligately chemolithoautotrophic, moderately halophilic, thiodenitrifying Gammaproteobacteria from hypersaline habitats Int J Syst Evol Microbiol, July 1, 2007; 57(7): 1582 - 1589. [Abstract] [Full Text] [PDF]
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W. Sun, Y. Huang, Y.-Q. Zhang, and Z.-H. Liu Streptomyces emeiensis sp. nov., a novel streptomycete from soil in China Int J Syst Evol Microbiol, July 1, 2007; 57(7): 1635 - 1639. [Abstract] [Full Text] [PDF]
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M. R. Carlsohn, I. Groth, G. Y. A. Tan, B. Schutze, H.-P. Saluz, T. Munder, J. Yang, J. Wink, and M. Goodfellow Amycolatopsis saalfeldensis sp. nov., a novel actinomycete isolated from a medieval alum slate mine Int J Syst Evol Microbiol, July 1, 2007; 57(7): 1640 - 1646. [Abstract] [Full Text] [PDF]
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J. M. Smith, H. Castro, and A. Ogram Structure and Function of Methanogens along a Short-Term Restoration Chronosequence in the Florida Everglades Appl. Envir. Microbiol., July 1, 2007; 73(13): 4135 - 4141. [Abstract] [Full Text] [PDF]
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F. Q. Wang, E. T. Wang, J. Liu, Q. Chen, X. H. Sui, W. F. Chen, and W. X. Chen Mesorhizobium albiziae sp. nov., a novel bacterium that nodulates Albizia kalkora in a subtropical region of China Int J Syst Evol Microbiol, June 1, 2007; 57(6): 1192 - 1199. [Abstract] [Full Text] [PDF]
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D. K. Liscombe and P. J. Facchini Molecular Cloning and Characterization of Tetrahydroprotoberberine cis-N-Methyltransferase, an Enzyme Involved in Alkaloid Biosynthesis in Opium Poppy J. Biol. Chem., May 18, 2007; 282(20): 14741 - 14751. [Abstract] [Full Text] [PDF]
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F. K. Bahrani-Mougeot, B. J. Paster, S. Coleman, S. Barbuto, M. T. Brennan, J. Noll, T. Kennedy, P. C. Fox, and P. B. Lockhart Molecular Analysis of Oral and Respiratory Bacterial Species Associated with Ventilator-Associated Pneumonia J. Clin. Microbiol., May 1, 2007; 45(5): 1588 - 1593. [Abstract] [Full Text] [PDF]
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R. Stephan, S. Van Trappen, I. Cleenwerck, M. Vancanneyt, P. De Vos, and A. Lehner Enterobacter turicensis sp. nov. and Enterobacter helveticus sp. nov., isolated from fruit powder Int J Syst Evol Microbiol, April 1, 2007; 57(4): 820 - 826. [Abstract] [Full Text] [PDF]
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Y. Ma, J. Zhang, and S. Chen Paenibacillus zanthoxyli sp. nov., a novel nitrogen-fixing species isolated from the rhizosphere of Zanthoxylum simulans Int J Syst Evol Microbiol, April 1, 2007; 57(4): 873 - 877. [Abstract] [Full Text] [PDF]
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D. Yu. Sorokin, S. van Pelt, T. P. Tourova, S. Takaichi, and G. Muyzer Acetonitrile degradation under haloalkaline conditions by Natronocella acetinitrilica gen. nov., sp. nov. Microbiology, April 1, 2007; 153(4): 1157 - 1164. [Abstract] [Full Text] [PDF]
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R. J. Owen and J. Xerry Geographical conservation of short inserts in the signal and middle regions of the Helicobacter pylori vacuolating cytotoxin gene Microbiology, April 1, 2007; 153(4): 1176 - 1186. [Abstract] [Full Text] [PDF]
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 S. Robbens, E. Derelle, C. Ferraz, J. Wuyts, H. Moreau, and Y. Van de Peer The Complete Chloroplast and Mitochondrial DNA Sequence of Ostreococcus tauri: Organelle Genomes of the Smallest Eukaryote Are Examples of Compaction Mol. Biol. Evol., April 1, 2007; 24(4): 956 - 968. [Abstract] [Full Text] [PDF]
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J. L. Smith, D. J. V. Drum, Y. Dai, J. M. Kim, S. Sanchez, J. J. Maurer, C. L. Hofacre, and M. D. Lee Impact of Antimicrobial Usage on Antimicrobial Resistance in Commensal Escherichia coli Strains Colonizing Broiler Chickens Appl. Envir. Microbiol., March 1, 2007; 73(5): 1404 - 1414. [Abstract] [Full Text] [PDF]
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G. Lear, B. Song, A. G. Gault, D. A. Polya, and J. R. Lloyd Molecular Analysis of Arsenate-Reducing Bacteria within Cambodian Sediments following Amendment with Acetate Appl. Envir. Microbiol., February 15, 2007; 73(4): 1041 - 1048. [Abstract] [Full Text] [PDF]
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I. V. Kublanov, M. I. Prokofeva, N. A. Kostrikina, T. V. Kolganova, T. P. Tourova, J. Wiegel, and E. A. Bonch-Osmolovskaya Thermoanaerobacterium aciditolerans sp. nov., a moderate thermoacidophile from a Kamchatka hot spring Int J Syst Evol Microbiol, February 1, 2007; 57(2): 260 - 264. [Abstract] [Full Text] [PDF]
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V. M. Milenkovic, A. Rivera, F. Horling, and B. H. F. Weber Insertion and Topology of Normal and Mutant Bestrophin-1 in the Endoplasmic Reticulum Membrane J. Biol. Chem., January 12, 2007; 282(2): 1313 - 1321. [Abstract] [Full Text] [PDF]
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Y. Ma, Z. Xia, X. Liu, and S. Chen Paenibacillus sabinae sp. nov., a nitrogen-fixing species isolated from the rhizosphere soils of shrubs Int J Syst Evol Microbiol, January 1, 2007; 57(1): 6 - 11. [Abstract] [Full Text] [PDF]
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E. Miranda-Tello, M.-L. Fardeau, C. Joulian, M. Magot, P. Thomas, J.-L. Tholozan, and B. Ollivier Petrotoga halophila sp. nov., a thermophilic, moderately halophilic, fermentative bacterium isolated from an offshore oil well in Congo Int J Syst Evol Microbiol, January 1, 2007; 57(1): 40 - 44. [Abstract] [Full Text] [PDF]
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F. Cappitelli, J. D. Nosanchuk, A. Casadevall, L. Toniolo, L. Brusetti, S. Florio, P. Principi, S. Borin, and C. Sorlini Synthetic Consolidants Attacked by Melanin-Producing Fungi: Case Study of the Biodeterioration of Milan (Italy) Cathedral Marble Treated with Acrylics Appl. Envir. Microbiol., January 1, 2007; 73(1): 271 - 277. [Abstract] [Full Text] [PDF]
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Z.-P. Liu, B.-J. Wang, X. Dai, X.-Y. Liu, and S.-J. Liu Zhouia amylolytica gen. nov., sp. nov., a novel member of the family Flavobacteriaceae isolated from sediment of the South China Sea Int J Syst Evol Microbiol, December 1, 2006; 56(12): 2825 - 2829. [Abstract] [Full Text] [PDF]
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M. Schmidt, A. Prieme, and P. Stougaard Rhodonellum psychrophilum gen. nov., sp. nov., a novel psychrophilic and alkaliphilic bacterium of the phylum Bacteroidetes isolated from Greenland Int J Syst Evol Microbiol, December 1, 2006; 56(12): 2887 - 2892. [Abstract] [Full Text] [PDF]
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J. Ng, I. Pavlasek, and U. Ryan Identification of Novel Cryptosporidium Genotypes from Avian Hosts Appl. Envir. Microbiol., December 1, 2006; 72(12): 7548 - 7553. [Abstract] [Full Text] [PDF]
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M. Hartmann and F. Widmer Community Structure Analyses Are More Sensitive to Differences in Soil Bacterial Communities than Anonymous Diversity Indices Appl. Envir. Microbiol., December 1, 2006; 72(12): 7804 - 7812. [Abstract] [Full Text] [PDF]
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 D. Kordis, N. Lovsin, and F. Gubensek Phylogenomic Analysis of the L1 Retrotransposons in Deuterostomia Syst Biol, December 1, 2006; 55(6): 886 - 901. [Abstract] [Full Text] [PDF]
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R. M. Barroco, A. Peres, A.-M. Droual, L. De Veylder, L. S. L. Nguyen, J. De Wolf, V. Mironov, R. Peerbolte, G. T.S. Beemster, D. Inze, et al. The Cyclin-Dependent Kinase Inhibitor Orysa;KRP1 Plays an Important Role in Seed Development of Rice Plant Physiology, November 1, 2006; 142(3): 1053 - 1064. [Abstract] [Full Text] [PDF]
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K. A. Palinska, C. F. Thomasius, J. Marquardt, and S. Golubic Phylogenetic evaluation of cyanobacteria preserved as historic herbarium exsiccata. Int J Syst Evol Microbiol, October 1, 2006; 56(Pt 10): 2253 - 2263. [Abstract] [Full Text] [PDF]
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J. Smerda, I. Sedlacek, Z. Pacova, E. Krejci, and L. Havel Paenibacillus sepulcri sp. nov., isolated from biodeteriorated mural paintings in the Servilia tomb. Int J Syst Evol Microbiol, October 1, 2006; 56(Pt 10): 2341 - 2344. [Abstract] [Full Text] [PDF]
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