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Bioinformatics Vol. 16 no. 4 2000
Pages 404-405
© 2000 Oxford University Press

The PSIPRED protein structure prediction server

Liam J. McGuffin 1,2, Kevin Bryson 1 and David T. Jones 1,2

1 Protein Bioinformatics Group, Department of Biological Sciences, University of Warwick, Coventry CV4 7AL, UK
2 Department of Biological Sciences, Brunel University, Uxbridge, UB8 3PH, UK

Received on November 8, 1999 ; accepted on December 14, 1999

Summary: The PSIPRED protein structure prediction server allows users to submit a protein sequence, perform a prediction of their choice and receive the results of the prediction both textually via e-mail and graphically via the web. The user may select one of three prediction methods to apply to their sequence: PSIPRED, a highly accurate secondary structure prediction method; MEMSAT 2, a new version of a widely used transmembrane topology prediction method; or GenTHREADER, a sequence profile based fold recognition method.

Availability: Freely available to non-commercial users at http://globin.bio.warwick.ac.uk/psipred/

Contact: david.jones{at}brunel.ac.uk


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