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Bioinformatics Vol. 16 no. 6 2000
Pages 568-569
© 2000 Oxford University Press

Applications Note

MIPSIM: similarity analysis of molecular interaction potentials

Miquel de Càceres 1, Jordi Villà 1,2, Juan J. Lozano 1,3 and Ferran Sanz 1,*

1 R.G. on Medical Informatics, IMIM, UPF, C/ Dr. Aiguader 80, E-08003 Barcelona, Spain
2 Department of Chemistry, University of Southern California, Los Angeles, CA, 90089, USA
3 School of Medicine, Universitat Autònoma de Barcelona, Spain

Received on December 20, 1999 ; accepted on February 8, 2000

Summary: MIPSIM is a computational package designed to analyse and compare 3D distributions of molecular interaction potentials (MIP) of series of biomolecules.

Availability: MIPSIM software is freely distributed to non-profit academic institutions through its web site: http://www1.imim.es/mipsim. Other organizations must contact the developers. GAMESS (http://www.msg.ameslab.gov/GAMESS/GAMESS.html) and GRID (peter{at}biop.ox.ac.uk) are external software required to perform some of the MIPSIM computations. They are obtained under conditions similar to MIPSIM’s.

Contact: mipsim{at}imim.es

* To whom correspondence should be addressed.


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