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Bioinformatics Vol. 16 no. 7 2000
Pages 654-655
© 2000 Oxford University Press

Applications Note

A cross-comparison of a large dataset of genes

G. Cannarozzi 1, M. T. Hallett 2,*, J. Norberg 2 and X. Zhou 2,3

1 Department of Chemistry, University of Florida, Gainesville 32611, USA
2 Computational Biochemistry Research Group (CBRG), Department of Computer Science, ETH Zentrum, Zürich, Switzerland
3 Department of Pharmaceutical Chemistry, ETH Irchel, Zürich, Switzerland

Received on November 28, 1999 ; revised on March 2, 2000 ; accepted on March 15, 2000

Summary: We make available a large cross-comparison for 16 of the completely sequenced genomes and additional eukaryotic genes. The alignments were performed at the protein level using liberal similarity bounds in order to capture as many significant alignments as possible. This dataset will be updated as new genomes become available.

Availability: The dataset is accessible at http://cbrg.inf.ethz.ch/AllAllGeneAlign.html

Contact: hallett{at}inf.ethz.ch

* To whom correspondence should be addressed.


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