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Bioinformatics Vol. 17 no. 12 2001
Pages 1244-1245
© 2001 Oxford University Press


Applications Note

MEGA2: molecular evolutionary genetics analysis software

Sudhir Kumar 1,*, Koichiro Tamura 2, Ingrid B. Jakobsen 3 and Masatoshi Nei 3

1 Department of Biology, Arizona State University, Tempe, AZ 85287-1501, USA
2 Department of Biological Sciences, Tokyo Metropolitan University, 1-1 Minami-ohsawa, Hachioji-shi, Tokyo 192-0397, Japan
3 Department of Biology and the Institute of Molecular Evolutionary Genetics, The Pennsylvania State University, University Park, PA 16802, USA

Received on February 27, 2001 ; revised on August 1, 2001 ; accepted on August 4, 2001

Summary: We have developed a new software package, Molecular Evolutionary Genetics Analysis version 2 (MEGA2), for exploring and analyzing aligned DNA or protein sequences from an evolutionary perspective. MEGA2 vastly extends the capabilities of MEGA version 1 by: (1) facilitating analyses of large datasets; (2) enabling creation and analyses of groups of sequences; (3) enabling specification of domains and genes; (4) expanding the repertoire of statistical methods for molecular evolutionary studies; and (5) adding new modules for visual representation of input data and output results on the Microsoft Windows platform.

Availability: http://www.megasoftware.net.

Contact: s.kumar{at}asu.edu

* To whom correspondence should be addressed.


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