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Bioinformatics Vol. 18 no. 3 2002
Pages 434-439
© 2002 Oxford University Press

JenPep: a database of quantitative functional peptide data for immunology

Martin J. Blythe , Irini A. Doytchinova and Darren R. Flower *

Edward Jenner Institute for Vaccine Research, Compton, Berkshire RG0 7NN, UK

Received on August 9, 2001 ; revised on October 2, 2001 ; accepted on October 18, 2001

Motivation: The compilation of quantitative binding data underlies attempts to derive tools for the accurate prediction of epitopes in cellular immunology and is part of our concerted goal to develop practical computational vaccinology.

Results: JenPep is a family of relational databases supporting the growing community of immunoinformaticians. It contains quantitative data on peptide binding to Major Histocompatibility Complexes (MHCs) and to Transmembrane Peptide Transporter (TAP), as well as an annotated list of T-cell epitopes.

Availability: The database is available via the Internet. An HTML interface allowing searching of the database can be found at the following address: http://www.jenner.ac.uk/JenPep.

Contact: darren.flower{at}jenner.ac.uk

* To whom correspondence should be addressed.


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