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Bioinformatics Vol. 19 no. 4 2003
Pages 543
© 2003 Oxford University Press

Applications Note

IS: a web-site for intron statistics

Endre Barta 1,*, László Kaján 1,2 and Sándor Pongor 2

1 Agricultural Biotechnology Center, 2100 Gödöllö, Hungary
2 Protein Structure and Bioinfomratics Group, International Centre for Genetic Engineering and Biotechnology, 34012 Trieste, Italy

Received on April 16, 2002 ; revised on August 5, 2002 ; accepted on October 25, 2002

Summary: A web server has been established for the statistical evaluation of introns in various taxonomic groups and the comparison of taxonomic groups in terms of intron type, length, base composition, etc. The options include the graphic analysis of splice sites and a probability test for exon-shuffling within the selected group.

Availability: introns.abc.hu, http://www.icgeb.trieste.it/introns

Contact: barta{at}abc.hu kajan{at}icgeb.trieste.it pongor{at}icgeb.trieste.it

* To whom correspondence should be addressed.


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