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Bioinformatics Advance Access originally published online on April 1, 2004
Bioinformatics 2004 20(14):2312-2314; doi:10.1093/bioinformatics/bth223
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Bioinformatics 20(14) © Oxford University Press 2004; all rights reserved.

Applications Note

SPrCY: comparison of structural predictions in the Saccharomyces cerevisiae genome

T. J. Dolinsky 1, P. M. J. Burgers 1, K. Karplus 2 and N. A. Baker 1,*

1 Department of Biochemistry and Molecular Biophysics, Center for Computational Biology, Washington University in St Louis, St Louis, MO 63110, USA and 2 Biomolecular Engineering Department, University of California at Santa Cruz, Santa Cruz, CA 95064, USA

Received on January 27, 2004; accepted on February 5, 2004
Advance Access Publication April 1, 2004

Summary: SPrCY is a web-accessible database which provides comparison of structure prediction results for the Saccharomyces cerevisiae genome. This web service offers the ability to search, analyze and compare the yeast structural predictions from sequence-only (Superfamily, PDBAA BLAST and Pfam) and sequence-structure-based (SAM-T02, 3D-PSSM, mGenTHREADER) methods.

Availability: The service is freely available via web at http://agave.wustl.edu/yeast/

Contact: baker{at}biochem.wustl.edu

* To whom correspondence should be addressed.


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