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Bioinformatics Advance Access originally published online on April 8, 2004
Bioinformatics 2004 20(15):2460-2462; doi:10.1093/bioinformatics/bth248
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Bioinformatics 20(15) © Oxford University Press 2004; all rights reserved.

Applications Note

POLYVIEW: a flexible visualization tool for structural and functional annotations of proteins

Aleksey A. Porollo , Rafal Adamczak and Jaroslaw Meller *

Children's Hospital Research Foundation, 3333 Burnet Avenue, Cincinnati, OH 45229, USA

Received on November 10, 2003; accepted on February 24, 2004
Advance Access Publication April 8, 2004

Summary: The POLYVIEW visualization server can be used to generate protein sequence annotations, including secondary structures, relative solvent accessibilities, functional motifs and polymorphic sites. Two-dimensional graphical representations in a customizable format may be generated for both known protein structures and predictions obtained using protein structure prediction servers. POLYVIEW may be used for automated generation of pictures with structural and functional annotations for publications and proteomic on-line resources.

Availability: http://polyview.cchmc.org

Contact: jmeller{at}cchmc.org

* To whom correspondence should be addressed.


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