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Bioinformatics Advance Access originally published online on July 9, 2004
Bioinformatics 2004 20(18):3654-3655; doi:10.1093/bioinformatics/bth400
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Bioinformatics vol. 20 issue 18 © Oxford University Press 2004; all rights reserved.

Applications Note

VisRD—visual recombination detection

Kristoffer Forslund 1,*, Daniel H. Huson 2 and Vincent Moulton 1,{dagger}

1 The Linnaeus Centre for Bioinformatics, BMC, Box 598, Uppsala 751 24, Sweden and 2 Center for Bioinformatics Tübingen (ZBIT), Sand 14, Tübingen 72076, Germany

Received on January 23, 2004; revised on June 15, 2004; accepted on July 7, 2004
Advance Access Publication July 9, 2004

Summary: VisRD, a program for visual recombination detection in a sequence alignment is presented. VisRD is written in Java and is designed to complement the multi-purpose phylogenetic software package SplitsTree4.

Availability: The software is freely available from http://www.lcb.uu.se/~vmoulton/software/visrd/

Contact: krfo6395{at}student.uu.se

* To whom correspondence should be addressed.

{dagger} Present address: School of Computing Science, University of East Anglia, Norwich NR47TJ, UK.


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