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Bioinformatics Advance Access originally published online on March 3, 2005
Bioinformatics 2005 21(10):2554-2555; doi:10.1093/bioinformatics/bti357
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© The Author 2005. Published by Oxford University Press. All rights reserved. For Permissions, please email: journals.permissions{at}oupjournals.org

ArrayCyGHt: a web application for analysis and visualization of array-CGH data

Su Young Kim 1,2, Suk Woo Nam 1,2, Sug Hyung Lee 1,2, Won Sang Park 1,2, Nam Jin Yoo 1,2, Jung Young Lee 1,2 and Yeun-Jun Chung 3,*

1Microdissection Genomics Research Center, The Catholic University of Korea Seoul, 137-701, Republic of Korea
2Department of Pathology, The Catholic University of Korea Seoul, 137-701, Republic of Korea
3Department of Microbiology, College of Medicine, The Catholic University of Korea Seoul, 137-701, Republic of Korea

*To whom correspondence should be addressed.

Summary: ArrayCyGHt is a web-based application tool for analysis and visualization of microarray-comparative genomic hybridization (array-CGH) data. Full process of array-CGH data analysis, from normalization of raw data to the final visualization of copy number gain or loss, can be straightforwardly achieved on this arrayCyGHt system without the use of any further software. ArrayCyGHt, therefore, provides an easy and fast tool for the analysis of copy number aberrations in any kinds of data format.

Availability: ArrayCyGHt can be accessed at http://genomics.catholic.ac.kr/arrayCGH/

Contact: yejun{at}catholic.ac.kr

Supplementary information: Technical documentation is available. See http://genomics.catholic.ac.kr/arrayCGH/


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