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Bioinformatics Advance Access originally published online on May 12, 2005
Bioinformatics 2005 21(14):3185-3186; doi:10.1093/bioinformatics/bti495
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© The Author 2005. Published by Oxford University Press. All rights reserved. For Permissions, please email: journals.permissions{at}oupjournals.org

M@CBETH: a microarray classification benchmarking tool

Nathalie L. M. M. Pochet *, Frizo A. L. Janssens , Frank De Smet , Kathleen Marchal , Johan A. K. Suykens and Bart L. R. De Moor

K. U. Leuven, ESAT–SCD, Kasteelpark Arenberg 10 B-3001 Leuven (Heverlee), Belgium

*To whom correspondence should be addressed.

Summary: Microarray classification can be useful to support clinical management decisions for individual patients in, for example, oncology. However, comparing classifiers and selecting the best for each microarray dataset can be a tedious and non-straightforward task. The M@CBETH (a MicroArray Classification BEnchmarking Tool on a Host server) web service offers the microarray community a simple tool for making optimal two-class predictions. M@CBETH aims at finding the best prediction among different classification methods by using randomizations of the benchmarking dataset. The M@CBETH web service intends to introduce an optimal use of clinical microarray data classification.

Availability: Web service at http://www.esat.kuleuven.be/MACBETH/

Contact: Nathalie.Pochet{at}esat.kuleuven.be


Received on April 18, 2005; revised on May 10, 2005; accepted on May 10, 2005

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