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Bioinformatics Advance Access originally published online on May 19, 2005
Bioinformatics 2005 21(14):3198-3199; doi:10.1093/bioinformatics/bti506
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© The Author 2005. Published by Oxford University Press. All rights reserved. For Permissions, please email: journals.permissions{at}oupjournals.org

Dasty and UniProt DAS: a perfect pair for protein feature visualization

Philip Jones 1,*, Nisha Vinod 1, Thomas Down 2, Andre Hackmann 1, Andreas Kahari 1, Ernst Kretschmann 1, Antony Quinn 1, Daniela Wieser 1, Henning Hermjakob 1 and Rolf Apweiler 1

1EMBL Outstation—European Bioinformatics Institute (EBI), Wellcome Trust Genome Campus Hinxton, Cambridge CB10 1SD, UK
2Wellcome Trust Sanger Institute, Wellcome Trust Genome Campus Hinxton, Cambridge CB10 1SA, UK

*To whom correspondence should be addressed.

Summary: In this study, we present two freely available and complementary Distributed Annotation System (DAS) resources: a DAS reference server that provides up-to-date sequence and annotation from UniProt, with additional feature links and database cross-references from InterPro and a DAS client implemented using Java and Macromedia Flash that is optimized for the display of protein features.

Availability: The Dasty DAS client is freely available at the following URLs: Dasty DAS Client (http://www.ebi.ac.uk/das-srv/uniprot/dasty/), Dasty Example Query (http://www.ebi.ac.uk/das-srv/uniprot/dasty/index.jsp?ID=Q24488), UniProt DAS Service (http://www.ebi.ac.uk/das-srv/uniprot/das), Dasty Documentation (http://www.ebi.ac.uk/dasty/) and UniProt DAS Documentation (http://www.ebi.ac.uk/uniprot-das/). It is intended that the Dasty client package and source code will be available for download and local installation in the coming weeks. The UniProt DAS reference server and the associated documentation can be freely accessed via the EBI site at the given link.

Contact: For further details of the Dasty client, please contact N.V. (nvinod{at}ebi.ac.uk). For further details of the UniProt DAS server, please contact P.J. (pjones{at}ebi.ac.uk).

Received on April 4, 2005; accepted on May 17, 2005

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