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Bioinformatics Advance Access originally published online on June 7, 2005
Bioinformatics 2005 21(16):3450-3451; doi:10.1093/bioinformatics/bti528
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© The Author 2005. Published by Oxford University Press. All rights reserved. For Permissions, please email: journals.permissions{at}oupjournals.org

MineBlast: a literature presentation service supporting protein annotation by data mining of BLAST results

Guido Dieterich *, Uwe Kärst , Jürgen Wehland and Lothar Jänsch

Division of Cell Biology, German Research Centre for Biotechnology (GBF) Mascheroder Weg 1, D-38124 Braunschweig, Germany

*To whom correspondence should be addressed.

Summary: MineBlast is a web service for literature search and presentation based on data-mining results received from UniProt. Users can submit a simple list of protein sequences via a web-based interface. MineBlast performs a BLASTP search in UniProt to identify names and synonyms based on homologous proteins and subsequently queries PubMed, using combined search terms inorder to find and present relevant literature.

Availability: http://leger2.gbf.de/cgi-bin/MineBlast.pl

Contact: gdi{at}gbf.de

Received on April 5, 2005; revised on June 3, 2005; accepted on June 5, 2005

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