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Bioinformatics Advance Access originally published online on July 19, 2005
Bioinformatics 2005 21(18):3681-3682; doi:10.1093/bioinformatics/bti587
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© The Author 2005. Published by Oxford University Press. All rights reserved. For Permissions, please email: journals.permissions{at}oupjournals.org

GeneCruiser: a web service for the annotation of microarray data

Ted Liefeld *, Michael Reich , Joshua Gould , Peili Zhang , Pablo Tamayo and Jill P. Mesirov

Broad Institute of MIT and Harvard Cambridge, MA 02141, USA

*To whom correspondence should be addressed.

Summary: GeneCruiser is a web service allowing users to annotate their genomic data by mapping microarray feature identifiers to gene identifiers from databases, such as UniGene, while providing links to web resources, such as the UCSC Genome Browser. It relies on a regularly updated database that retrieves and indexes the mappings between microarray probes and genomic databases. Genes are identified using the Life Sciences Identifier standard.

Availability: GeneCruiser is freely available in the following forms: Web service and Web application, http://www.genecruiser.org; GenePattern, GeneCruiser access has been integrated into our microarray analysis platform, GenePattern. http://www.genepattern.org

Contact: liefeld{at}broad.mit.edu

Received on March 23, 2005; revised on May 16, 2005; accepted on July 14, 2005

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