Skip Navigation


Bioinformatics Advance Access originally published online on August 30, 2005
Bioinformatics 2005 21(20):3938-3939; doi:10.1093/bioinformatics/bti649
This Article
Right arrow Full Text Freely available
Right arrow FREE Full Text (Print PDF) Freely available
Right arrow All Versions of this Article:
21/20/3938    most recent
bti649v1
Right arrow Comments: Submit a response
Right arrow Alert me when this article is cited
Right arrow Alert me when Comments are posted
Right arrow Alert me if a correction is posted
Services
Right arrow Email this article to a friend
Right arrow Similar articles in this journal
Right arrow Similar articles in ISI Web of Science
Right arrow Similar articles in PubMed
Right arrow Alert me to new issues of the journal
Right arrow Add to My Personal Archive
Right arrow Download to citation manager
Right arrow Search for citing articles in:
ISI Web of Science (4)
Right arrowRequest Permissions
Google Scholar
Right arrow Articles by Gu, S.
Right arrow Articles by Kidd, K. K.
Right arrow Search for Related Content
PubMed
Right arrow PubMed Citation
Right arrow Articles by Gu, S.
Right arrow Articles by Kidd, K. K.
Social Bookmarking
Add to CiteULike   Add to Connotea   Add to Del.icio.us  
What's this?

© The Author 2005. Published by Oxford University Press. All rights reserved. For Permissions, please email: journals.permissions{at}oxfordjournals.org

HAPLOT: a graphical comparison of haplotype blocks, tagSNP sets and SNP variation for multiple populations

Sheng Gu *, Andrew J. Pakstis and Kenneth K. Kidd

Department of Genetics, Yale University School of Medicine New Haven, USA

*To whom correspondence should be addressed.

Summary: Understanding of human variation relevant to association studies can benefit from population comparison, especially comparing populations in the same geographical region. Variations in linkage disequilibrium patterns, in tagSNP sets, and in SNP heterozygosities among populations can be used to infer the evolutionary pattern. We present here a win32 system based Perl/Tk application for visual comparisons of these variations in different populations.

Availability: The application package is available at http://info.med.yale.edu/genetics/kkidd/programs.html

Contact: sheng.gu{at}yale.edu

Received on July 13, 2005; revised on August 24, 2005; accepted on August 25, 2005

Add to CiteULike CiteULike   Add to Connotea Connotea   Add to Del.icio.us Del.icio.us    What's this?


This article has been cited by other articles:


Home page
 GeneticsHome page
A. J. Amaral, H.-J. Megens, R. P. M. A. Crooijmans, H. C. M. Heuven, and M. A. M. Groenen
Linkage Disequilibrium Decay and Haplotype Block Structure in the Pig
Genetics, May 1, 2008; 179(1): 569 - 579.
[Abstract] [Full Text] [PDF]


Disclaimer: Please note that abstracts for content published before 1996 were created through digital scanning and may therefore not exactly replicate the text of the original print issues. All efforts have been made to ensure accuracy, but the Publisher will not be held responsible for any remaining inaccuracies. If you require any further clarification, please contact our Customer Services Department.