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Bioinformatics Advance Access originally published online on November 25, 2004
Bioinformatics 2005 21(8):1693-1694; doi:10.1093/bioinformatics/bti161
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© The Author 2004. Published by Oxford University Press. All rights reserved. For Permissions, please email: journals.permissions{at}oupjournals.org

Procom: a web-based tool to compare multiple eukaryotic proteomes

Jin Billy Li 1,*,{dagger}, Miao Zhang 1,2,{dagger}, Susan K. Dutcher 1 and Gary D. Stormo 1

1Department of Genetics, Washington University School of Medicine St. Louis, MO 63110, USA
2Department of Biomedical Engineering, Washington University St. Louis, MO 63130, USA

*To whom correspondence should be addressed.

Summary: Each organism has traits that are shared with some, but not all, organisms. Identification of genes needed for a particular trait can be accomplished by a comparative genomics approach using three or more organisms. Genes that occur in organisms without the trait are removed from the set of genes in common among organisms with the trait. To facilitate these comparisons, a web-based server, Procom, was developed to identify the subset of genes that may be needed for a trait.

Availability: The Procom program is freely available with documentation and examples at http://ural.wustl.edu/~billy/Procom/

Contact: billy{at}ural.wustl.edu


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