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Bioinformatics Advance Access originally published online on March 23, 2007
Bioinformatics 2007 23(11):1431-1433; doi:10.1093/bioinformatics/btm101
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© The Author 2007. Published by Oxford University Press. All rights reserved. For Permissions, please email: journals.permissions@oxfordjournals.org

IlluminaGUI: Graphical User Interface for analyzing gene expression data generated on the Illumina platform

Prof. Joachim L. Schultze * and Daniela Eggle

Molecular Tumor Biology and Tumor Immunology, Department of Internal Medicine I, University of Cologne, Cologne, Germany

*To whom correspondence should be addressed.


  Abstract

Summary: IlluminaGUI is a graphical user interface implemented for analyzing microarray data from the Illumina BeadChip platform. All key components of a microarray experiment, including quality control, normalization, inference and classification methods are provided in a ‘point and click’ approach. IlluminaGUI is implemented as a R package based on the R-Tcl/Tk interface and is available for platforms on which R runs including Windows, Mac and Unix-type machines.

Availability: http://IlluminaGUI.dnsalias.org

Contact: joachim.schultze{at}uk-koeln.de

Associate Editor: Prof. Martin Bishop

Received on March 7, 2007; accepted on March 8, 2007

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