Bioinformatics Advance Access originally published online on February 18, 2007
Bioinformatics 2007 23(8):1032-1034; doi:10.1093/bioinformatics/btm047
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ClusterDraw web server: a tool to identify and visualize clusters of binding motifs for transcription factors
Department of Molecular and Cell Biology, University of California, Berkeley, Berkeley, CA 94720, USA
| Abstract |
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ClusterDraw is a program aimed to identification of binding sites and binding-site clusters. Major difference of the ClusterDraw from existing tools is its ability to scan a wide range of parameter values and weigh statistical significance of all possible clusters, smaller than a selected size. The program produces graphs along with decorated FASTA files. ClusterDraw web server is available at the following URL: http://flydev.berkeley.edu/cgi-bin/cld/submit.cgi
Contact: dxp{at}berkeley.edu
Supplementary information: Supplementary data are available at Bioinformatics online.
Associate Editor: Alex Bateman
Received on October 25, 2006; revised on January 12, 2007; accepted on February 6, 2007