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Bioinformatics Advance Access originally published online on February 18, 2007
Bioinformatics 2007 23(8):1038-1039; doi:10.1093/bioinformatics/btm058
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© The Author 2007. Published by Oxford University Press. All rights reserved. For Permissions, please email: journals.permissions@oxfordjournals.org

A new JAVA interface implementation of THESIAS: testing haplotype effects in association studies

D. A. Tregouet * and V. Garelle

INSERM, UMR S 525 and Université Pierre et Marie Curie-Paris6, UMR S 525, Paris, France

*To whom correspondence should be addressed.


  Abstract

Summary: THESIAS (Testing Haplotype EffectS In Association Studies) is a popular software for carrying haplotype association analysis in unrelated individuals. In addition to the command line interface, a graphical JAVA interface is now proposed allowing one to run THESIAS in a user-friendly manner. Besides, new functionalities have been added to THESIAS including the possibility to analyze polychotomous phenotype and X-linked polymorphisms.

Availability: The software package including documentation and example data files is freely available at http://genecanvas.ecgene.net. The source codes are also available upon request.

Contact: david.tregouet{at}chups.jussieu.fr

Associate Editor: Martin Bishop

Received on December 26, 2006; revised on February 9, 2007; accepted on February 9, 2007

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